[Biopython-dev] GSoC python variant update 7

Lenna Peterson arklenna at gmail.com
Mon Jul 9 04:33:57 UTC 2012

Post: http://arklenna.tumblr.com/post/26812132902/

This week, I wrote a script for PyVCF that can filter a file by sample
as it's being parsed. It's currently named `vcf_sample_filter.py`.
It's designed to be functional from the command line, the Python
interpreter, or as a module.

Next up: come up with a generic-via-extensibility representation of a
variant. I'm working through some examples and should have a basic
outline soon.


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