[Biopython-dev] Biopython under PyPy

Peter Cock p.j.a.cock at googlemail.com
Mon Sep 19 23:05:21 UTC 2011


>> We're down to these failures,
>>
>> test_CAPS.py
>> test_Pathway.py
>> test_Restriction.py
>> test_SeqIO_index.py - leaking handles
>>
>> I'll look at test_SeqIO_index.py a bit more, but the others
>> are more curious. They could indicate some fragile code
>> in Biopython which is implementation specific, or perhaps
>> they hit a bug in PyPy. Is anyone interested in finding out?
>>
>> Otherwise we can skip them for now, so that the whole
>> test suite passes, and get PyPy added to the BuildBot
>> for nightly regression testing.
>
> I could take a look at test_Restriction.py this weekend, I think.
>

Great.

I think test_SeqIO_index.py is working now.

Peter



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