[Biopython-dev] Calculating bootstrap values from a set of trees

Nicolas Rochette nicolas.rochette at univ-lyon1.fr
Mon Sep 12 19:49:06 UTC 2011

Hi Peter,

What you are looking for exists in the bppconsense program from the 
"Bio++ Suite" http://home.gna.org/bppsuite/

With something like :
bppconsense input.tree.file=NEWICK_FILE method=Input 
input.trees.file=BOOTSTRAPS_FILE output.tree.file=OUTPUT_FILE


Nicolas Rochette

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