[Biopython-dev] [Biopython - Bug #3263] (Closed) Phylo: Move clade 'color' and 'width' attributes to BaseTree

[redmine at redmine.open-bio.org]

Issue #3263 has been updated by Eric Talevich.

Status changed from New to Closed
% Done changed from 0 to 100

Did it:
https://github.com/biopython/biopython/commit/5608398c558801db2505dffaa6fb85b47435a3fc

Nice to be able to add colors for Phylo.draw() without remembering the incantation of as_phyloxml().
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Bug #3263: Phylo: Move clade  'color'  and 'width' attributes to BaseTree
https://redmine.open-bio.org/issues/3263

Author: Eric Talevich
Status: Closed
Priority: Normal
Assignee: Biopython Dev Mailing List
Category: 
Target version: 
URL: 


The 'color' and 'width' attributes are associated with PhyloXML trees right now, but are useful enough to be associated with the base Tree object (which you'd get from parsing a Newick or Nexus file), even though Newick and Nexus can't serialize this info.


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