[Biopython-dev] [Biopython] Pairwise alignment - is it a generic function?

[Peter Cock]

On Wed, Oct 26, 2011 at 2:31 PM, João Rodrigues <anaryin at gmail.com> wrote:
> Hello all,
> Coming back after lunch...
> I managed to load a matrix using this:
>
> from Bio import pairwise2
> from Bio.SubsMat import MatrixInfo as m
> #print dir(m)
> matrix = m.blosum60
> pairwise2.align.localdx(seqA, seqB, matrix)
>
> Thanks a lot for the help, it was simple after all, just a bit hard to start
> with..

Hi João,

Could you write a little documentation for the pairwise2 docstring?
Just something short based on the above example would be great
(ideally as a doctest).

Thanks,

Peter