[Biopython-dev] [Biopython] Pairwise alignment - is it a generic function?

Peter Cock p.j.a.cock at googlemail.com
Wed Oct 26 11:11:57 UTC 2011

On Wed, Oct 26, 2011 at 12:02 PM, João Rodrigues <anaryin at gmail.com> wrote:
> Hey Peter,
> Thanks for the answer. How do I pass the matrix and which format should it
> be on? Is there an example I could read?
> João [...] Rodrigues
> http://nmr.chem.uu.nl/~joao

Not that I know of, but adding one to the docstrings and test_pairwise2.py
would be great. I think you use it with a score matrix as a dictionary from


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