[Biopython-dev] Moving strand & db ref from SeqFeature to FeatureLocation

Peter Cock p.j.a.cock at googlemail.com
Tue Oct 11 11:28:35 UTC 2011

On Tue, Oct 11, 2011 at 12:20 PM, Brad Chapman <chapmanb at 50mail.com> wrote:
> Peter;
>> https://github.com/peterjc/biopython/tree/f_loc2
>> It moves the strand, ref and db_ref properties from
>> the SeqFeature object to the FeatureLocation object,
>> implementing read/write proxy methods for backward
>> compatibility.
> Thanks for the integer work and for this. I'm agreed that this is a more
> logical way to store the strand (and cross-ref) information. +1 from me
> on checking it in,
> Brad

OK, that's done. Cheers Brad.

As I said before, if anyone doesn't like the new printing
of the FeatureLocation with how I present the strand and
database reference, we can change that. There are
examples in the SeqFeature.py and SeqRecord.py docstrings.



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