[Biopython-dev] [Biopython - Feature #3310] (New) HMMER parser

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Fri Oct 28 19:45:53 EDT 2011


Issue #3310 has been reported by J M.

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Feature #3310: HMMER parser
https://redmine.open-bio.org/issues/3310

Author: J M
Status: New
Priority: Normal
Assignee: 
Category: 
Target version: 
URL: 


This is a parser for the output of hmmsearch from the HMMER package.  Given the output of the hmmsearch, this program can retrieve information for each of the alignments including the expected values, the starting and ending positions of each alignment, as well as insert, deletion and mismatch information for each alignment.


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