[Biopython-dev] MAF Parser/Writer/Indexer

Mon May 16 20:30:23 UTC 2011

On 05/16/2011 01:54 PM, Peter Cock wrote:
> That is my assumption for how dots have been used in alignment
> formats.
>
> If you have some MAF examples using dots, that would be great.

I added a snippet of mouse chromosome 10 from UCSC, but it doesn't have 
dots.  I've actually never come across one with dots.

Added support for a 'track' line at the beginning of a file as well, 
among some other small changes.

https://github.com/polyatail/biopython/commits/alignio-maf

Andrew