[Biopython-dev] Adding QUIET argument to PDBParser()

[João Rodrigues]

Hello all,

The PDBParser is sometimes a bit too loud, making meaningful output drown in
dozens of warnings messages. This is partly (mostly) my fault because of the
element guessing addition. Therefore, I'd suggest adding a QUIET argument
(bool) to PDBParser that would supress all warnings. Of course, default is
False. It might come handy for batch processing of proteins.

I've added it to my pdb_enhancements branch so you can take a look:

https://github.com/JoaoRodrigues/biopython/commit/5405d8a4cc555bcfce6ad0915db62a131cee9493

Cheers,

João [...] Rodrigues
http://nmr.chem.uu.nl/~joao