[Biopython-dev] pypaml

[Brandon Invergo]

Well, it's not much, but how's this?
https://github.com/brandoninvergo/biopython/tree/doc-branch
Do you want me to go more into detail about the options available like
in the wikior is this sufficient as a tutorial? Just let me know...

Cheers,
Brandon

On Mon, Jun 27, 2011 at 5:26 PM, Brandon Invergo <b.invergo at gmail.com> wrote:
> Hi Eric,
> No problem, I'll start writing something up now.
> Cheers,
> -brandon
>
> On Sun, Jun 26, 2011 at 7:32 PM, Eric Talevich <eric.talevich at gmail.com> wrote:
>> Hi Brandon,
>>
>> I just added a stub for Bio.Phylo.PAML to the main Tutorial:
>> https://github.com/biopython/biopython/commit/190a85c5bde9c079fa5cee4ab9f8ee3362538cb8
>>
>> Do you think you could add some more to that section, maybe pulling a chunk
>> of content from the wiki page you just wrote? If you're not comfortable with
>> LaTeX you can just point me to some text and I'll add it.
>>
>> Thanks,
>> Eric
>>
>> On Thu, Jun 16, 2011 at 11:34 AM, Brandon Invergo <b.invergo at gmail.com>
>> wrote:
>>>
>>> Ok, the documentation is finished:
>>> http://biopython.org/wiki/PAML
>>>
>>> Cheers,
>>> Brandon
>>>
>>> On Wed, Jun 15, 2011 at 1:54 PM, Brad Chapman <chapmanb at 50mail.com> wrote:
>>> > Brandon;
>>> >
>>> >> Ok I've just sent the email to the main list.
>>> >
>>> > Awesome, thanks for this. Hope this convinces some other folks to
>>> > take a look.
>>> >
>>> >> I can write up some documentation this week. What is the official
>>> >> procedure for adding documentation to the wiki, if any? Or can I just
>>> >> create an account and start writing?
>>> >
>>> > Create an account and start writing. Nothing official except that
>>> > documentation is good.
>>> >
>>> >> Also, just to double-check, are my docstrings all sufficient or should
>>> >> I expand those?
>>> >
>>> > Your code comments looked great to me. The end user documentation
>>> > seems to be the main thing at this point: describing how someone can
>>> > pick up and get started with the code.
>>> >
>>> > Thanks again for all the work,
>>> > Brad
>>> > _______________________________________________
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>>> > Biopython-dev at lists.open-bio.org
>>> > http://lists.open-bio.org/mailman/listinfo/biopython-dev
>>> >
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>>
>>
>