[Biopython-dev] [Bug 3166] Bio.PDB.DSSP fails to work on PDBs with HETATM

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Wed Jan 5 17:44:22 UTC 2011


http://bugzilla.open-bio.org/show_bug.cgi?id=3166





------- Comment #1 from biopython-bugzilla at maubp.freeserve.co.uk  2011-01-05 12:44 EST -------
Hi,

Biopython 1.50 was released in April 2009, and is nearly two years old.
However, checking for recent changes to the file Bio/PDB/DSSP.py nothing looks
to have altered the __init__ code you're interested in.

https://github.com/biopython/biopython/commits/master/Bio/PDB/DSSP.py

Could you submit your proposed changes as a patch against the latest code
please? You can attach the patch file to this bug.

Also an explicit example (ideally just a few lines of Python) showing how to
reproduce the problem would be very helpful.

Thanks!

Peter


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