[Biopython-dev] [Bug 2947] Bio.HMM calculates wrong viterbi path

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2947


georg.lipps at fhnw.ch changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|NEW                         |RESOLVED
         Resolution|                            |WORKSFORME




------- Comment #7 from georg.lipps at fhnw.ch  2011-02-04 10:00 EST -------
Yes,

the code seems to work now. 

The probability of attaining the first state is now the transition probability
of remaining in the same state (here 0.95).

I like the suggestion of comment #5 to explicity state the a begin state with
the corresponding transition probabilities.

A big THANK for fixing,

Georg


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