[Biopython-dev] Python 3 status (ignoring our C code and most dependencies)

[Eric Talevich]

> On Thu, Sep 9, 2010 at 1:08 PM, Peter <biopython at maubp.freeserve.co.uk> wrote:
>> Eric - Can you reproduce this test_Phylo.py failure on your machine?
[...]
>> ------------------------------------------------------------------------
>> test_Phylo ... FAIL
>>
>> Traceback (most recent call last):
>>  File "test_Phylo.py", line 47, in test_convert
>>    Phylo.convert(self.mem_file, 'nexus', mem_file_2, 'phyloxml')
[...]
>>  File "/home/xxx/lib/python3.1/xml/etree/ElementTree.py", line 677, in _write
>>    file.write(_encode("<" + tag, encoding))
>> TypeError: string argument expected, got 'bytes'
>>

I fixed this one:
http://github.com/biopython/biopython/commit/9b5faa2d1affdf439acfbbec911cde0862111005

No progress on the DisorderedResidue error yet.

-Eric