[Biopython-dev] Deprecated code to remove for Biopython 1.56

[Peter]

On Wed, Sep 1, 2010 at 12:15 PM, Peter <biopython at maubp.freeserve.co.uk> wrote:
> Hi all,
>
> The following were deprecated in Biopython 1.52 (released 22 September 2009),
> so I think they can be removed ready for Biopython 1.56 now:
>
> Bio.EZRetrieve, Bio.NetCatch, Bio.File.SGMLHandle, Bio.FilteredReader
>

Done:
http://github.com/biopython/biopython/commit/1097994fa2557cbee14a23c5354b643f312f0b07

>
> Bio.AlignAce and Bio.MEME
>

Bartek - could you handle removing Bio.AlignAce and Bio.MEME please (assuming
you agree that makes sense)?

> We also still need to look at Bio.Translate, Bio.Transcribe and linked modules:
> http://lists.open-bio.org/pipermail/biopython-dev/2010-August/008210.html

See this thread:
http://lists.open-bio.org/pipermail/biopython-dev/2010-September/008231.html

Peter