[Biopython-dev] _pwm.c

Peter biopython at maubp.freeserve.co.uk
Thu Oct 28 15:54:07 UTC 2010


On Thu, Oct 28, 2010 at 3:37 PM, Bartek Wilczynski <barwil at gmail.com> wrote:
>
> this is the fast implementation of DNA motif searching written by Michiel
> some time ago. It is exposed in the Bio.Motif API in the form of .scanPWM
> method:
>

On a related topic, is there a pure Python fall back for _pwm.c
in Bio.Motif? If not, would it be easy to add (e.g. for Jython).

Thanks,

Peter



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