[Biopython-dev] test_PopGen_GenePop_EasyController.py failure on Jython

Tiago Antão tiagoantao at gmail.com
Wed Nov 10 14:35:31 UTC 2010


2010/11/10 Peter <biopython at maubp.freeserve.co.uk>:
> I've just recently put Jython 2.5.1 on my Windows box, and
> in addition to the test_get_alleles failure, I also see OSErrors
> about being unable to delete files (but the F stats test still
> passes). This seems to be a wider issue, affecting more than
> just test_PopGen_GenePop_EasyController.py, but it does
> seem to be OS specific (no problems deleting files in
> Jython 2.5.1 on my Mac, I've not tried on Linux).

The OSError has to potential to be somewhat nasty (i.e. throughout
other Bio.* modules) as it is silent. There might be tests failing
that report OK.

Tiago



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