[Biopython-dev] Features of the GSOC branch ready to be merged

[João Rodrigues]

Hello all,

I've been looking at the code I wrote for the GSOC to see what is ready to
be merged in the main branch. I have to thank Kristian and whoever
participated in the Python & Friends for the input.

>From what I gathered, and from my own tests, I believe the following
functions are solid enough:


   1. Bio/PDB/Atom.py<https://github.com/JoaoRodrigues/biopython/blob/GSOC2010/Bio/PDB/Atom.py#L75-105>:
   automatically guessing atom element from atom name
   2. Bio/PDB/Structure.py
      1. Building biological unit from REMARK 350 in the header
(link<https://github.com/JoaoRodrigues/biopython/blob/GSOC2010/Bio/PDB/Structure.py#L78-110>
      )
      2. Renumbering residues
(link<https://github.com/JoaoRodrigues/biopython/blob/GSOC2010/Bio/PDB/Structure.py#L66-76>
      )


Let me know what you all think.

Best,

João [...] Rodrigues
http://doeidoei.wordpress.com