[Biopython-dev] Ready for Biopython 1.54 release?

Eric Talevich eric.talevich at gmail.com
Fri May 14 16:14:15 UTC 2010


On Fri, May 14, 2010 at 2:17 AM, Peter <biopython at maubp.freeserve.co.uk>wrote:

> On Fri, May 14, 2010 at 4:08 AM, Eric Talevich <eric.talevich at gmail.com>
> wrote:
> > On Thu, May 13, 2010 at 4:37 AM, Peter <biopython at maubp.freeserve.co.uk>
> > wrote:
> >>
> >> Hello all,
> >>
> >> Are there any outstanding issues we should address before making
> >> the Biopython 1.54 release?
> >>
> >> Eric has made a good start on covering Bio.Phylo in the tutorial,
> >> which can be easily proof read online:
> >> http://biopython.org/DIST/docs/tutorial/Tutorial-dev.html
> >> http://biopython.org/DIST/docs/tutorial/Tutorial-dev.pdf
> >>
> >
> > I wrote some more, but something very inconvenient happened to my laptop
> > just after I pushed the commit to my own branch on GitHub:
> >
> http://github.com/etal/biopython/commit/960449b1ea9b713ca8111c40d930fc404340fdc2
> >
> > This is a description of every TreeMixin method, ripped from the
> docstrings
> > / epydoc output and cleaned up a little. The main thing I still need to
> > explain is how the find_* arguments work.
> >
> > However, if we want to get the release out quickly, then all of this can
> be
> > moved to the wiki instead, if you'd prefer.
> >
> > -Eric
>
> Hi Eric,
>
> It sounds like giving you a little more time will make the Phylo
> chapter much more useful.
>
> I'm not going to have time today, and while I could do the release
> from home my Windows development machine is at work.
>
> Shall we aim for a release early next week then? Say Monday or
> Tuesday?
>
> Peter
>

Sure. I'll aim for pushing my documentation to GitHub on Saturday or Sunday.

-Eric



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