[Biopython-dev] [Bug 3069] Support for EMBL-line files from IMGT

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=3069





------- Comment #16 from laserson at mit.edu  2010-05-18 11:45 EST -------
(In reply to comment #15)
> Uri - Could you explain what your code was trying to do with the record header
> parsing? An example or two would be great. Thanks!

So the approach I used was to keep the feature parser the exact same as it was
in the EMBL parser.  In the parse_header function, I would determine for each
record what the indentation was, and then changed FEATURE_QUALIFIER_INDENT and
FEATURE_QUALIFIER_SPACER for each record.  This way, the standard EMBL parser
would work fine, and there would never be any problems if the feature key was
adjacent to the location qualifier. 


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