[Biopython-dev] RNA secondary structure parsing

[Kristian Rother]

Hi,

Took me a while to do some basic clean up in my code - finally managed to
contribute something.

I just added a branch 'rna' with basic RNA 2D format parsers (Vienna, CT,
BPSEQ), and a module that can extract 2D structure elements (helices,
loops, bulges, junctions).

http://github.com/krother/biopython/tree/rna

Its all in:
Bio.RNA
Tests.test_RNA_*

Any kind of feedback is welcome.

Best Regards,
    Kristian