[Biopython-dev] Primary Sequence of all protein (help)

Rodrigo Faccioli rodrigo_faccioli at uol.com.br
Tue Mar 16 19:24:58 UTC 2010

Hi all,

I want to know the primary sequence (fasta file) of all proteins. In other
the words, I would like a database which contain the fasta files of all

I'm a computer scientist and I don't know how hard it is. However, we have
worked with SEQRES section of PDB files and BioPython. So, we want to work
with fasta files and BioPython to check our results.

I searched the NCBI web-site where I found a lot of databases. I confess I'm
lost with them :)

Sorry if my email is a basic question. But, I'm very lost.

Thanks in advance,

Rodrigo Antonio Faccioli
Ph.D Student in Electrical Engineering
University of Sao Paulo - USP
Engineering School of Sao Carlos - EESC
Department of Electrical Engineering - SEL
Intelligent System in Structure Bioinformatics
Phone: 55 (16) 3373-9366 Ext 229
Curriculum Lattes - http://lattes.cnpq.br/1025157978990218

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