[Biopython-dev] [Bug 3029] PhyloXML.Phylogeny.is_preterminal() fails

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=3029


eric.talevich at gmail.com changed:

           What    |Removed                     |Added
----------------------------------------------------------------------------
             Status|NEW                         |RESOLVED
         Resolution|                            |FIXED




------- Comment #1 from eric.talevich at gmail.com  2010-03-19 09:22 EST -------
(In reply to comment #0)
> tree.is_preterminal()
> 
> raises an AttributeError
> "'Phylogeny' object has no attribute 'clades'"
> File BaseTree.py line 442.
> 
> git fetch on Feb. 22.
> 

Thanks for catching this. It's fixed on the trunk now.

I also checked the rest of TreeMixin for other occurrences of the same problem
(accessing self.clades directly instead of going through self.root.clades) and
found none, so it shouldn't happen again.


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