[Biopython-dev] Planning for Biopython 1.54

Kyle kellrott at gmail.com
Fri Mar 12 13:00:45 EST 2010


>
>
> It is probably time to starting getting ready for Biopython 1.54,
> perhaps aiming to release within about a months time?
>
> This means not landing any major additions to the trunk for now (keep
> things like GFF and Geography on branches for now).
>

I think the zxJDBC support (Jython MySQL for BioSQL) was almost done. I
don't think it counts as a major addition.  I think to finish it off, we
just needed to finalize the driver names.

For post 1.54 stuff, I have some HMMER3, Pfam, and GO  parsing code (Chris
Lasher has a GO fork as well). But I need some community feedback to fill in
the interface holes.

Kyle


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