[Biopython-dev] Python 3 and Bio.SeqIO.index()

[Vince S. Buffalo]

There's a slight (perhaps non-significant) speed up on OS X. In Python 2.7
on OS X 10.5.8:

vinceb$ python index2.py s_7_1_sequence.fasta
s_7_1_sequence.fasta
Indexed in 32.35s

vinceb$ python index2b.py s_7_1_sequence.fasta
s_7_1_sequence.fasta
Indexed in 26.01s

best,
Vince


On Wed, Jul 14, 2010 at 11:09 AM, Peter <biopython at maubp.freeserve.co.uk>wrote:

> SRR001666_1.fasta




-- 
Vince Buffalo
Programmer
Bioinformatics Core
UC Davis Genome Center
University of California, Davis

"There's real poetry in the real world. Science is the poetry of reality."
-Richard Dawkins