[Biopython-dev] zxJDBC support for BioSQL

[Kyle Ellrott]

I haven't played with Postgre yet (don't even have it installed).
Sqlite as a python package hasn't been standardized to Jython yet  (
http://bugs.jython.org/issue1682864 )

One option is to call SQLite JDBC (
http://www.xerial.org/trac/Xerial/wiki/SQLiteJDBC ) rather then reusing the
existing SQLite code.
But like zxJDBC, the jar would need to be in the CLASSPATH variable for the
code to work.


Kyle

On Tue, Jan 12, 2010 at 1:51 PM, Peter <biopython at maubp.freeserve.co.uk>wrote:

> On Tue, Jan 12, 2010 at 9:46 PM, Kyle Ellrott <kellrott at gmail.com> wrote:
> > I've pulled from the main branch and fixed a few problems.  I've tested
> the
> > code against Sqlite, Python Mysql, and Jython Mysql.  All three seem to
> be
> > working right now.
> >
> > Kyle
>
> Excellent - I had a play last month, and Jython Mysql seemed to work.
> Do you know if/how to get SQLite and/or PostgreSQL drivers installed
> under zxJDBC?
>
> Peter
>