[Biopython-dev] [Bug 2704] Parser for the markx10 alignment format
bugzilla-daemon at portal.open-bio.org
bugzilla-daemon at portal.open-bio.org
Fri Jan 15 07:38:49 EST 2010
http://bugzilla.open-bio.org/show_bug.cgi?id=2704
------- Comment #5 from biopython-bugzilla at maubp.freeserve.co.uk 2010-01-15 07:38 EST -------
According to the change log for the just released EMBOSS 6.2:
Alignment output included headers only for EMBOSS-specific
formats. The headers have been dropped from the FASTA MARKX0
through MARKX10 formats to allow standard FASTA suite parsers to
use the EMBOSS versions of these outputs.
See also:
http://lists.open-bio.org/pipermail/emboss-dev/2009-August/000618.html
Fingers crossed this means we will be able to parse their output
with the "fasta-m10" parser in Bio.AlignIO.
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