[Biopython-dev] [Bug 2554] Creating an Alignment from a list of SeqRecord objects

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2554





------- Comment #4 from biopython-bugzilla at maubp.freeserve.co.uk  2010-02-26 11:26 EST -------
I've started a possible implementation of an improved multiple
sequence alignment object on a github branch:
http://github.com/peterjc/biopython/commits/alignment-obj

This already handles:
Bug 2553 - Adding SeqRecord objects to an alignment (append or extend)
Bug 2554 - Creating an Alignment from a list of SeqRecord objects

I also plan to cover:
Bug 2551 - Adding advanced __getitem__ e.g. align[1:2,5:-5]
Bug 2552 - Adding alignments 


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