[Biopython-dev] Reverse complement SeqRecord and features

[Nick Loman]

Peter wrote:
> On Tue, Dec 21, 2010 at 1:56 PM, Peter <biopython at maubp.freeserve.co.uk> wrote:
>   
>> http://github.com/peterjc/biopython/commits/seqrecord-rc
>>
>> You can read the reverse_complement method docstring online here:
>>
>> https://github.com/peterjc/biopython/blob/7f17bbfef9882ef039d02ff04908d01ab400b71b/Bio/SeqRecord.py
>>
>> I've had a quick look, and to rebase it or merge it requires some manual
>> merge conflict resolution due to changes in Bio/SeqFeature.py and its
>> unit tests. However, I'll make time to update the branch if you are willing
>> to test this, ...
>>     
Hi Peter
> http://github.com/peterjc/biopython/commits/seqrecord-rc
> has been rebased to the master, so please test this new branch:
> http://github.com/peterjc/biopython/commits/seqrecord-rc2
>
> I need to double check the SeqRecord import in Seq.py is sane, but
> the unit tests are passing.
>   
The branch seems to work fine on my application, although that's 
obviously not an exhaustive test.

Cheers

Nick