[Biopython-dev] [Bug 2578] The GenBank SeqRecord parser does not record molecule type or if circular

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2578





------- Comment #6 from biopython-bugzilla at maubp.freeserve.co.uk  2010-12-12 14:51 EST -------
Nick - Do you happen to know off hand what BioPerl uses for circular/linear
when loading a GenBank file into BioSQL? As I noted in comment #1 we should
try to be consistent, and the easiest way is to store it in the SeqRecord
annotations dictionary under the same key name as BioPerl uses, with the
same values (that way we don't need any special case code in our BioSQL
interface).


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