[Biopython-dev] test_PhyloXML.py on Python 3

[Peter]

On Tue, Aug 17, 2010 at 12:25 PM, Peter <biopython at maubp.freeserve.co.uk> wrote:
>
> The resulting code is a little different from my auto2to3 branch - all to do
> with long/int changes. I think my script was keeping the unwanted fixes to
> Bio/Phylo/PhyloXML.py as well as the useful fixes made to these files:
>
> * Bio/SeqIO/InsdcIO.py - testing for isinstance of int or long
> * BioSQL/Loader.py - testing for isinstance of int or long
> * Bio/Prosite/Prodoc.py - using long(handle.tell())
> * Bio/Prosite/__init__.py - using long(handle.tell())

And also:
* Bio/SwissProt/SProt.py - using long(handle.tell())
* Bio/Blast/NCBIStandalone.py - using long(float(...))

I still think all these can be fixed to work without needing the 2to3 long
fixer.

Peter