[Biopython-dev] [Bug 3127] New: SeqIO.write appends text to fasta comments

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=3127

           Summary: SeqIO.write appends text to fasta comments
           Product: Biopython
           Version: 1.54
          Platform: PC
        OS/Version: Windows XP
            Status: NEW
          Severity: minor
          Priority: P2
         Component: Other
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: jared.ackers at smithsdetection.com


When using the following SeqIO command: 

SeqIO.write(SeqIO.parse("file.txt", "tab"), "file.fas", "fasta")

SeqIO will append the text " <unknown description>" to every sequence ID in the
output file.  The input file has two tab-delimited columns, the first with a
(custom) sequence ID and the second with the corresponding sequence.


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