[Biopython-dev] Getting nucleotide sequence for GenBank features

[Kyle Ellrott]

I guess it's a question of making it a method of the SeqFeature vs a Method
of the SeqRecord.  My try put the extract feature in the SeqRecord, because
that's what SeqFeature belongs to.  But  it actually makes more sense to
have the SeqFeature operate on a Seq.  If people want to create features (or
copy them from other SeqRecords) and use them to extract subsequences from
other Seq objects this format makes it more natural/flexable.

Kyle


On Wed, Nov 4, 2009 at 2:05 PM, Peter <biopython at maubp.freeserve.co.uk>wrote:

> On Wed, Nov 4, 2009 at 6:25 PM, Kyle Ellrott <kellrott at gmail.com> wrote:
> > I pulled the this branch and tested it on the project I originally needed
> > the code for.  It looks like it's working.
>
> Cool. What do you think of this interface? Does a method of the
> SeqFeature seem natural to you?
>
> Peter
>