[Biopython-dev] Preparing for Biopython 1.50 (beta)

David Schruth dschruth at u.washington.edu
Mon Mar 16 23:15:39 UTC 2009


I've got some 454 and Solid data you could test it on too.

Has anybody else looked into how these other two Next Gen formats might 
complicate things?

Brad Chapman wrote:
> Peter;
>
>   
>> I think we should probably do another release soon 
>>     
>
> Good call. +1 from me.
>
>   
>> I'd like to include the following changes as part of the beta, but it
>> would be sensible to have someone else try these out first.  Any
>> volunteers?
>>
>> Bug 2767 - Bio.SeqIO support for FASTQ and QUAL files
>>     
>
> The code for this looked good when I reviewed it earlier. I will
> test it out with some solexa reads from here this week; any reason
> not to check the patch and files into CVS? Then I can fire up my
> coal-powered revision control system, feed two punch cards into the
> mouth of the machine, hope the vacuum tubes don't burn out again,
> and check it out locally.
>
> Brad
> _______________________________________________
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> http://lists.open-bio.org/mailman/listinfo/biopython-dev
>   
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