[Biopython-dev] [Bug 2779] Seq.count() docstring should note unexpected behaviour
bugzilla-daemon at portal.open-bio.org
bugzilla-daemon at portal.open-bio.org
Fri Mar 6 16:08:50 UTC 2009
http://bugzilla.open-bio.org/show_bug.cgi?id=2779
biopython-bugzilla at maubp.freeserve.co.uk changed:
What |Removed |Added
----------------------------------------------------------------------------
Status|NEW |RESOLVED
Resolution| |FIXED
------- Comment #9 from biopython-bugzilla at maubp.freeserve.co.uk 2009-03-06 11:08 EST -------
I have updated the docstrings in CVS to stress that like the python string a
non-overlapping count is used, marking this bug as fixed.
>From the mailing list discussion having a overlapping count available would be
a welcome enhancement, perhaps as a separate method, e.g. overlapping_count.
Leighton's patch or Sebastian's code in Bio/SeqUtils/MeltingTemp.py could be
used for the implementation. We can do this on a new enhancement bug, once a
consensus is reached on the mailing list.
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