[Biopython-dev] [Bug 2779] Seq.count() docstring should note unexpected behaviour

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2779


biopython-bugzilla at maubp.freeserve.co.uk changed:

           What    |Removed                     |Added
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             Status|NEW                         |RESOLVED
         Resolution|                            |FIXED




------- Comment #9 from biopython-bugzilla at maubp.freeserve.co.uk  2009-03-06 11:08 EST -------
I have updated the docstrings in CVS to stress that like the python string a
non-overlapping count is used, marking this bug as fixed.

>From the mailing list discussion having a overlapping count available would be
a welcome enhancement, perhaps as a separate method, e.g. overlapping_count. 
Leighton's patch or Sebastian's code in Bio/SeqUtils/MeltingTemp.py could be
used for the implementation.  We can do this on a new enhancement bug, once a
consensus is reached on the mailing list.


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