[Biopython-dev] [Bug 2865] Phd writer class for SeqIO

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2865





------- Comment #5 from biopython-bugzilla at maubp.freeserve.co.uk  2009-07-02 05:57 EST -------
(In reply to comment #4)
> (In reply to comment #2)
> > Following the email from David Gordon the Consed author via
> > Gordon Roberston (thanks Gordon) on the dev list
> > (http://lists.open-bio.org/pipermail/biopython-dev/2009-June/006322.html)

I've checked in those two examples and extended the parsing unit tests now.
This showed a small issue with PHD "file names" with a space in them, which
I have resolved following our convention for FASTA files. This means converting
PHD to FASTA/FASTQ/QUAL works nicely.

Peter


-- 
Configure bugmail: http://bugzilla.open-bio.org/userprefs.cgi?tab=email
------- You are receiving this mail because: -------
You are the assignee for the bug, or are watching the assignee.