[Biopython-dev] [Bug 2382] Generic Roche or GSFlex "FASTA" parser

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Thu Feb 19 18:19:49 UTC 2009


------- Comment #15 from jflatow at northwestern.edu  2009-02-19 13:19 EST -------
Created an attachment (id=1247)
 --> (http://bugzilla.open-bio.org/attachment.cgi?id=1247&action=view)
command line tool/library for sifting through and transforming complex
(multiline) records

I should have posted this earlier. Basically this is the strategy I have been
taking for dealing with complex record types (multiline), so that you can
filter them the way you would with sed/awk or other stream editing tools. This
is far from perfect, and it may not be helpful, but perhaps it will give a
better idea of what I was picturing. 

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