[Biopython-dev] [Bug 2969] Addition of SeqmatchallCommandline to Emboss/Applications.py

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2969





------- Comment #1 from biopython-bugzilla at maubp.freeserve.co.uk  2009-12-09 16:53 EST -------
A nice easy one to wrap at first glance. I would like to also include the
"aformat" output to set the output alignment format (useful to set to pair or
simple for AlignIO to parse it as the "emboss" alignment format - see the
needle and water wrappers). You could then also add a run time test to
test_Emboss.py piping this to AlignIO... ;)


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