[Biopython-dev] [Bug 2966] Primer3Commandline does not use EMBOSS 6.1.0 arguments

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2966





------- Comment #2 from lpritc at scri.sari.ac.uk  2009-12-21 11:49 EST -------
I also found an issue with the PrimerSearchCommandline.  The command line
options -sequences and -primers do not appear to be used in EMBOSS6.1.0, having
been replaced by -seqall and -infile, respectively.  I changed the options
accordingly, and the modified files are available at
http://github.com/widdowquinn/biopython/tree/emboss-branch.


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