[Biopython-dev] [Bug 2866] SQLite support for BioSQL

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2866





------- Comment #16 from cymon.cox at gmail.com  2009-12-12 13:39 EST -------
(In reply to comment #15)
> (In reply to comment #14)
> > (In reply to comment #11)
> > > I will be able to test the effect of your changes on MySQL, hopefully Cymon
> > > can do this on PostgreSQL - not that I anticipate and regressions, but best
> > > to be sure ;)
> > 
> > Is SQLite ":memory:" TESTDB working for you on Brads branch?
> 
> I didn't try that specifically - just SQLite on disk. Brad?
> 
> >
> > It fails for me, all else is fin (incl the SQLite file db)
> >
> 
> But the good news is Brad's changes to BioSQL/*.py haven't caused any
> regressions on PostreSQL :)

Yep, no problems, although I only tried the psycopg2 driver (with and without
rules deletion).

Psycopg version 1 support has had a deprecation warning since version 1.53
http://bugzilla.open-bio.org/show_bug.cgi?id=2851#c4 - when can we drop it?

C.


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