[Biopython-dev] [Bug 2820] New: Convert test_PDB.py to unittest

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Thu Apr 23 21:52:08 UTC 2009


http://bugzilla.open-bio.org/show_bug.cgi?id=2820

           Summary: Convert test_PDB.py to unittest
           Product: Biopython
           Version: Not Applicable
          Platform: PC
        OS/Version: Linux
            Status: NEW
          Severity: enhancement
          Priority: P3
         Component: Unit Tests
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: eric.talevich at gmail.com


The current test script for Bio.PDB uses the print-and-compare approach. I've
written an equivalent test script using unittest, assuming that style is the
preferred one.

It was written to go with Bug 2754, but now lives on my pdbtidy branch:
http://github.com/etal/biopython/tree/pdbtidy

This script could also live alongside the original test_PDB.py for awhile, as
an additional check on Bio.PDB's error handling.


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