[Biopython-dev] [Bug 2815] Bio.Application command line interfaces

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2815





------- Comment #12 from cymon.cox at gmail.com  2009-04-28 12:30 EST -------
(In reply to comment #11)
> (In reply to comment #9)
> > 
> > Ive also just checked in (to the github branch) some unittests for MUSCLE,
> > MAFFT, PRANK, and DIALIGN. These just check that the app runs and the return
> > code is 0 - a few other checks are made but not much else. 
> > 
> 
> I think I was looking at your master branch, rather than the applic-int branch:
> http://github.com/cymon/biopython-github-master/commits/applic-int
> I see the changes now...

In those unittests, you'll note that I have no idea about the windows
environment! (dont use window, never have used windows). I just copied from the
Emboss wrapper...

C.


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