[Biopython-dev] [Bug 2819] Bio.SeqIO support for NCBI protein tables (*.ptt files)
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bugzilla-daemon at portal.open-bio.org
Wed Apr 22 12:19:15 EDT 2009
http://bugzilla.open-bio.org/show_bug.cgi?id=2819
------- Comment #3 from biopython-bugzilla at maubp.freeserve.co.uk 2009-04-22 12:19 EST -------
Created an attachment (id=1284)
--> (http://bugzilla.open-bio.org/attachment.cgi?id=1284&action=view)
Patch to Tests/test_SeqIO_features.py to check "genbank" vs "ptt" parsing
Requires additional input files from the NCBI to go in Tests/GenBank,
ftp://ftp.ncbi.nih.gov/genomes/Protozoa/Cryptosporidium_parvum/NC_006980.ptt
ftp://ftp.ncbi.nih.gov/genomes/Bacteria/Yersinia_pestis_biovar_Microtus_91001/NC_005816.ptt
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