[Biopython-dev] SwissProt parsing inconsistency between Bio.SeqIO, Bio.SwissProt

[Michiel de Hoon]

--- On Tue, 4/21/09, Peter Cock <p.j.a.cock at googlemail.com> wrote:

> Thinking this over, we should take that SwissProt file and
> load it into BioSQL using BioPerl, and see how they dealt
> with the DE lines, and try and do the same for Bio.SeqIO
> in order that loading it into BioSQL with Biopython gives
> more or less the same thing.

Good point. Does anybody know how BioPerl stores SwissProt files in SQL databases? I know neither Perl nor SQL ...

--Michiel