[Biopython-dev] [Bug 2543] Bio.Nexus.Trees can't handle named ancestors

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2543





------- Comment #5 from fkauff at biologie.uni-kl.de  2008-09-02 11:44 EST -------
(In reply to comment #3)

Hi Peter,

haven't done anything yet. The previously mentioned code works different
(assigning values to nodes within a [&...] comment), rather than names to
nodes.

Assigning names to nodes can be very useful, but as Cymon mention, P4 seems to
be the only program that can handle them.
In my opinion, naming nodes is a feature, and I would not regard the lack of
this feature as a bug.
But I'll have a look at the code and see how easy this can be changed. It would
actually be nice if P4 and Bio.Nexus, both being python programs, could read
each other's trees.

(Hi Cymon :-) )

Frank




> Hi Frank,
> 
> Did you get a chance to look at that code for named ancestors?
> 
> Thanks
> 
> Peter
> 


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