[Biopython-dev] about the SeqRecord and SeqFeature classes

[Jose Blanca]

Hi:

On Tuesday 23 September 2008 16:37:29 Peter wrote:
> > SeqRecord still doesn't have a __getitem__ method.
>
> What do you think of the __getitem__ method proposed in attachment 942
> on Bug 2507?
> http://bugzilla.open-bio.org/show_bug.cgi?id=2507
I've been looking at the path and is just what I need.
Using a SeqRecord with that __getitem__ method is almost trivial. Attach to 
this email inside mySeqRecord.py is a possible implementation. What do you 
think?
For the qualities a tuple of ints would do.

For implementing some details new style classes would be better. Are you 
planning to move Seq and SeqRecord to the new style?
Best regards,


-- 
Jose M. Blanca Postigo
Instituto Universitario de Conservacion y
Mejora de la Agrodiversidad Valenciana (COMAV)
Universidad Politecnica de Valencia (UPV)
Edificio CPI (Ciudad Politecnica de la Innovacion), 8E
46022 Valencia (SPAIN)
Tlf.:+34-96-3877000 (ext 88473)
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