[Biopython-dev] [Bug 2589] Errors in running tests in 1.48

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2589





------- Comment #4 from biopython-bugzilla at maubp.freeserve.co.uk  2008-09-24 18:24 EST -------
(In reply to comment #3)
> > test_MarkovModel
> > ================
> 
> 24.2
> 
> Based on a Google search, this is a 64bit problem with Python 2.5 and Numeric. 
> 
> So either do:
> 1) Drop the [:] from the left-hand side: 
> lp_initial = lp_arcout_t[:,0]

Over on the mailing list, Bruce reported this fix works for both numpy and
Numeric.  I've now checked this into CVS, MarkovModel.py revision 1.6.

Thanks Bruce!


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