[Biopython-dev] [Bug 2585] New: Error in Bio.SeqUtils.apply_on_multi_fasta

[bugzilla-daemon at portal.open-bio.org]

http://bugzilla.open-bio.org/show_bug.cgi?id=2585

           Summary: Error in Bio.SeqUtils.apply_on_multi_fasta
           Product: Biopython
           Version: 1.48
          Platform: PC
        OS/Version: Linux
            Status: NEW
          Severity: normal
          Priority: P2
         Component: Main Distribution
        AssignedTo: biopython-dev at biopython.org
        ReportedBy: sbassi at gmail.com


Function "apply_on_multi_fasta" (in SeqUtils) has properties that are no longer
valid. See this line:

      arguments = [record.sequence]

And this line:

         results.append('>%s\n%s' % (record.title, result))

This provokes an error when trying to run this function (sorry I don't have the
error message in this computer).
A possible replacement for both lines:

      arguments = [record.seq]
and:
      results.append('>%s\n%s' % (record.name, result))


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