[Biopython-dev] [Bug 2381] translate and transcibe methods for the Seq object (in Bio.Seq)

bugzilla-daemon at portal.open-bio.org bugzilla-daemon at portal.open-bio.org
Sun Oct 19 16:06:24 UTC 2008


http://bugzilla.open-bio.org/show_bug.cgi?id=2381





------- Comment #20 from mmokrejs at ribosome.natur.cuni.cz  2008-10-19 12:06 EST -------
(In reply to comment #17)
> def translate(self, table = "Standard", stop_symbol = "*"):
>     """Terms a nucleotide sequence into a protein sequence (amino acids).
> 
>     This method will translate DNA or RNA sequences, but for a protein
>     sequence an exception is raised.
> 
>     table - Which codon table to use?  This can be either a name
>             (string) or an NCBI identifier (integer).

Would be nice to document a URL to a page documenting the translation tables
in the doc string.


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